3HO6 image
Deposition Date 2009-06-01
Release Date 2009-06-23
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3HO6
Keywords:
Title:
Structure-function analysis of inositol hexakisphosphate-induced autoprocessing in clostridium difficile toxin A
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Toxin A
Gene (Uniprot):tcdA
Chain IDs:A, B
Chain Length:267
Number of Molecules:2
Biological Source:Clostridium difficile
Ligand Molecules
Primary Citation
Structure-function analysis of inositol hexakisphosphate-induced autoprocessing in Clostridium difficile toxin A.
J.Biol.Chem. 284 21934 21940 (2009)
PMID: 19553670 DOI: 10.1074/jbc.M109.018929

Abstact

The action of Clostridium difficile toxins A and B depends on inactivation of host small G-proteins by glucosylation. Cellular inositol hexakisphosphate (InsP6) induces an autocatalytic cleavage of the toxins, releasing an N-terminal glucosyltransferase domain into the host cell cytosol. We have defined the cysteine protease domain (CPD) responsible for autoprocessing within toxin A (TcdA) and report the 1.6 A x-ray crystal structure of the domain bound to InsP6. InsP6 is bound in a highly basic pocket that is separated from an unusual active site by a beta-flap structure. Functional studies confirm an intramolecular mechanism of cleavage and highlight specific residues required for InsP6-induced TcdA processing. Analysis of the structural and functional data in the context of sequences from similar and diverse origins highlights a C-terminal extension and a pi-cation interaction within the beta-flap that appear to be unique among the large clostridial cytotoxins.

Legend

Protein

Chemical

Disease

Primary Citation of related structures