3HJ6 image
Deposition Date 2009-05-21
Release Date 2010-06-09
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3HJ6
Keywords:
Title:
Structure of Halothermothrix orenii fructokinase (FRK)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.28
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Fructokinase
Gene (Uniprot):Hore_18220
Chain IDs:A, B
Chain Length:327
Number of Molecules:2
Biological Source:Halothermothrix orenii
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Crystal structure of a fructokinase homolog from Halothermothrix orenii
J.Struct.Biol. 171 397 401 (2010)
PMID: 20493950 DOI: 10.1016/j.jsb.2010.05.007

Abstact

Fructokinase (FRK; EC 2.7.1.4) catalyzes the phosphorylation of d-fructose to d-fructose 6-phosphate (F6P). This irreversible and near rate-limiting step is a central and regulatory process in plants and bacteria, which channels fructose into a metabolically active state for glycolysis. Towards understanding the mechanism of FRK, here we report the crystal structure of a FRK homolog from a thermohalophilic bacterium Halothermothrixorenii (Hore_18220 in sequence databases). The structure of the Hore_18220 protein reveals a catalytic domain with a Rossmann-like fold and a beta-sheet "lid" for dimerization. Based on comparison of Hore_18220 to structures of related proteins, we propose its mechanism of action, in which the lid serves to regulate access to the substrate binding sites. Close relationship of Hore_18220 and plant FRK enzymes allows us to propose a model for the structure and function of FRKs.

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Primary Citation of related structures