3HIE image
Deposition Date 2009-05-19
Release Date 2010-02-23
Last Version Date 2024-11-27
Entry Detail
PDB ID:
3HIE
Keywords:
Title:
Structure of the membrane-binding domain of the Sec3 subunit of the Exocyst complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Exocyst complex component SEC3
Gene (Uniprot):SEC3
Chain IDs:A, B, C, D
Chain Length:171
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Structure-function study of the N-terminal domain of exocyst subunit Sec3.
J.Biol.Chem. 285 10424 10433 (2010)
PMID: 20139078 DOI: 10.1074/jbc.M109.096966

Abstact

The exocyst is an evolutionarily conserved octameric complex involved in polarized exocytosis from yeast to humans. The Sec3 subunit of the exocyst acts as a spatial landmark for exocytosis through its ability to bind phospholipids and small GTPases. The structure of the N-terminal domain of Sec3 (Sec3N) was determined ab initio and defines a new subclass of pleckstrin homology (PH) domains along with a new family of proteins carrying this domain. Respectively, N- and C-terminal to the PH domain Sec3N presents an additional alpha-helix and two beta-strands that mediate dimerization through domain swapping. The structure identifies residues responsible for phospholipid binding, which when mutated in cells impair the localization of exocyst components at the plasma membrane and lead to defects in exocytosis. Through its ability to bind the small GTPase Cdc42 and phospholipids, the PH domain of Sec3 functions as a coincidence detector at the plasma membrane.

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Primary Citation of related structures
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