3HCG image
Entry Detail
PDB ID:
3HCG
Keywords:
Title:
Structure of the C-terminal domain (MsrB) of Neisseria meningitidis PilB (reduced form)
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2009-05-06
Release Date:
2009-10-13
Method Details:
Experimental Method:
Resolution:
1.82 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Peptide methionine sulfoxide reductase msrA/msrB
Chain IDs:A, B, C, D
Chain Length:146
Number of Molecules:4
Biological Source:Neisseria meningitidis serogroup A
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
Methionine sulfoxide reductase B displays a high level of flexibility.
J.Mol.Biol. 394 83 93 (2009)
PMID: 19733575 DOI: 10.1016/j.jmb.2009.08.073

Abstact

Methionine sulfoxide reductases (Msrs) are enzymes that catalyze the reduction of methionine sulfoxide back to methionine. In vivo, Msrs are essential in the protection of cells against oxidative damage to proteins and in the virulence of some bacteria. Two structurally unrelated classes of Msrs, named MsrA and MsrB, exist. MsrB are stereospecific to R epimer on the sulfur of sulfoxide. All MsrB share a common reductase step with the formation of a sulfenic acid intermediate. For the subclass of MsrB whose recycling process passes through the formation of an intradisulfide bond, the recycling reducer is thioredoxin. In the present study, X-ray structures of Neisseria meningitidis MsrB have been determined. The structures have a fold based on two beta-sheets, similar to the fold already described for other MsrB, with the recycling Cys63 located in a position favorable for disulfide bond formation with the catalytic Cys117. X-ray structures of Xanthomonas campestris MsrB have also been determined. In the C117S MsrB structure with a bound substrate, the recycling Cys31 is far from Ser117, with Trp65 being essential in the reductase step located in between. This positioning prevents the formation of the Cys31-Cys117 disulfide bond. In the oxidized structure, a drastic conformational reorganization of the two beta-sheets due to withdrawal of the Trp65 region from the active site, which remains compatible with an efficient thioredoxin-recycling process, is observed. The results highlight the remarkable structural malleability of the MsrB fold.

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