3H8L image
Deposition Date 2009-04-29
Release Date 2009-06-02
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3H8L
Keywords:
Title:
The first X-ray structure of a sulfide:quinone oxidoreductase: insights into sulfide oxidation mechanism
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.57 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 65 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:NADH oxidase
Gene (Uniprot):sqr
Chain IDs:A, B
Chain Length:409
Number of Molecules:2
Biological Source:Acidianus ambivalens
Primary Citation
Structural and functional insights into sulfide:quinone oxidoreductase.
Biochemistry 48 5613 5622 (2009)
PMID: 19438211 DOI: 10.1021/bi9003827

Abstact

A sulfide:quinone oxidoreductase (SQR) was isolated from the membranes of the hyperthermoacidophilic archaeon Acidianus ambivalens, and its X-ray structure, the first reported for an SQR, was determined to 2.6 A resolution. This enzyme was functionally and structurally characterized and was shown to have two redox active sites: a covalently bound FAD and an adjacent pair of cysteine residues. Most interestingly, the X-ray structure revealed the presence of a chain of three sulfur atoms bridging those two cysteine residues. The possible implications of this observation in the catalytic mechanism for sulfide oxidation are discussed, and the role of SQR in the sulfur dependent bioenergetics of A. ambivalens, linked to oxygen reduction, is addressed.

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