3GYR image
Entry Detail
PDB ID:
3GYR
Keywords:
Title:
Structure of Phenoxazinone synthase from Streptomyces antibioticus reveals a new type 2 copper center.
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-04-05
Release Date:
2009-04-28
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.22
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Phenoxazinone synthase
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L
Chain Length:612
Number of Molecules:12
Biological Source:Streptomyces antibioticus
Primary Citation
Structure of Phenoxazinone Synthase from Streptomyces Antibioticus Reveals a New Type 2 Copper Center.
Biochemistry 45 4378 ? (2006)
PMID: 16584173

Abstact

The multicopper oxidase phenoxazinone synthase (PHS) catalyzes the penultimate step in the biosynthesis of the antibiotic actinomycin D by Streptomyces antibioticus. PHS exists in two oligomeric forms: a dimeric form and a hexameric form, with older actinomycin-producing cultures containing predominately the hexameric form. The structure of hexameric PHS has been determined using X-ray diffraction to a resolution limit of 2.30 A and is found to contain several unexpected and distinctive features. The structure forms a hexameric ring that is centered on a pseudo 6-fold axis and has an outer diameter of 185 A with a large central cavity that has a diameter of 50 A. This hexameric structure is stabilized by a long loop connecting two domains; bound to this long loop is a fifth copper atom that is present as a type 2 copper. This copper atom is not present in any other multicopper oxidase, and its presence appears to stabilize the hexameric structure.

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