ISDA

Deposition Date 2009-03-09

Release Date 2010-03-31

Last Version Date 2023-11-01

Entry Detail

PDB ID:

3GJL

Keywords:

DNA

Title:

crystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-one

Biological Source:

Source Organism:

(Taxon ID: ) (Taxon ID: )

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.92 Å

R-Value Free:

0.26

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 32 1 2

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Macromolecular Entities

Polymer Type:polydeoxyribonucleotide
Molecule:5'-D(*CP*GP*CP*GP*AP*A)-3'
Chain IDs:A
Chain Length:6
Number of Molecules:1
Biological Source:

Polymer Type:polydeoxyribonucleotide
Molecule:5'-D(P*TP*TP*(B7C)P*GP*CP*G)-3'
Chain IDs:B
Chain Length:6
Number of Molecules:1
Biological Source:

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
B7C	B	DC	?

Ligand Molecules

Primary Citation

Insights into the stabilizing contributions of bicyclic cytosine analogues: crystal structures of DNA duplexes containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-one

Takenaka, A, Juan, E.C.M, Shimizu, S, Haraguchi, T, Xiao, M, Kurose, T, Ohkubo, A, Sekine, M, Shibata, T, Millington, C.M, William, D.M.Show

To be Published ? ? ? (?)

Primary Citation of related structures