3GGZ image
Entry Detail
PDB ID:
3GGZ
Title:
Crystal Structure of S.cerevisiae Ist1 N-terminal domain in complex with Did2 MIM motif
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-03-02
Release Date:
2009-09-08
Method Details:
Experimental Method:
Resolution:
3.80 Å
R-Value Free:
0.30
R-Value Work:
0.28
R-Value Observed:
0.28
Space Group:
P 42 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Increased sodium tolerance protein 1
Chain IDs:A, B, C, D
Chain Length:193
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Polymer Type:polypeptide(L)
Description:Vacuolar protein-sorting-associated protein 46
Chain IDs:E, F, G, H
Chain Length:29
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Ligand Molecules
Primary Citation
Structural basis of Ist1 function and Ist1-Did2 interaction in the multivesicular body pathway and cytokinesis.
MOLECULAR BIOLOGY OF THE CELL 20 3514 3524 (2009)
PMID: 19477918 DOI: 10.1091/mbc.E09-05-0403

Abstact

The ESCRT machinery functions in several important eukaryotic cellular processes. The AAA-ATPase Vps4 catalyzes disassembly of the ESCRT-III complex and may regulate membrane deformation and vesicle scission as well. Ist1 was proposed to be a regulator of Vps4, but its mechanism of action was unclear. The crystal structure of the N-terminal domain of Ist1 (Ist1NTD) reveals an ESCRT-III subunit-like fold, implicating Ist1 as a divergent ESCRT-III family member. Ist1NTD specifically binds to the ESCRT-III subunit Did2, and cocrystallization of Ist1NTD with a Did2 fragment shows that Ist1 interacts with the Did2 C-terminal MIM1 (MIT-interacting motif 1) via a novel MIM-binding structural motif. This arrangement indicates a mechanism for intermolecular ESCRT-III subunit association and may also suggest one form of ESCRT-III subunit autoinhibition via intramolecular interaction.

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Primary Citation of related structures