3GBN image
Deposition Date 2009-02-20
Release Date 2009-03-10
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3GBN
Title:
Crystal Structure of Fab CR6261 in Complex with the 1918 H1N1 influenza virus hemagglutinin
Biological Source:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
I 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin
Gene (Uniprot):HA
Chain IDs:A
Chain Length:331
Number of Molecules:1
Biological Source:Influenza A virus (A/Brevig Mission/1/1918(H1N1))
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin
Gene (Uniprot):HA
Chain IDs:B
Chain Length:179
Number of Molecules:1
Biological Source:Influenza A virus (A/Brevig Mission/1/1918(H1N1))
Polymer Type:polypeptide(L)
Molecule:Fab Heavy Chain
Chain IDs:C (auth: H)
Chain Length:226
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Fab Lambda Light Chain
Chain IDs:D (auth: L)
Chain Length:221
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Antibody recognition of a highly conserved influenza virus epitope.
Science 324 246 251 (2009)
PMID: 19251591 DOI: 10.1126/science.1171491

Abstact

Influenza virus presents an important and persistent threat to public health worldwide, and current vaccines provide immunity to viral isolates similar to the vaccine strain. High-affinity antibodies against a conserved epitope could provide immunity to the diverse influenza subtypes and protection against future pandemic viruses. Cocrystal structures were determined at 2.2 and 2.7 angstrom resolutions for broadly neutralizing human antibody CR6261 Fab in complexes with the major surface antigen (hemagglutinin, HA) from viruses responsible for the 1918 H1N1 influenza pandemic and a recent lethal case of H5N1 avian influenza. In contrast to other structurally characterized influenza antibodies, CR6261 recognizes a highly conserved helical region in the membrane-proximal stem of HA1 and HA2. The antibody neutralizes the virus by blocking conformational rearrangements associated with membrane fusion. The CR6261 epitope identified here should accelerate the design and implementation of improved vaccines that can elicit CR6261-like antibodies, as well as antibody-based therapies for the treatment of influenza.

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Primary Citation of related structures