3G98 image
Deposition Date 2009-02-13
Release Date 2009-10-06
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3G98
Keywords:
Title:
Crystal Structure of the C-Ala domain from Aquifex aeolicus alanyl-tRNA synthetase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.85 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Alanyl-tRNA synthetase
Gene (Uniprot):alaS
Chain IDs:A, B
Chain Length:111
Number of Molecules:2
Biological Source:Aquifex aeolicus
Primary Citation
The C-Ala domain brings together editing and aminoacylation functions on one tRNA.
Science 325 744 747 (2009)
PMID: 19661429 DOI: 10.1126/science.1174343

Abstact

Protein synthesis involves the accurate attachment of amino acids to their matching transfer RNA (tRNA) molecules. Mistranslating the amino acids serine or glycine for alanine is prevented by the function of independent but collaborative aminoacylation and editing domains of alanyl-tRNA synthetases (AlaRSs). We show that the C-Ala domain plays a key role in AlaRS function. The C-Ala domain is universally tethered to the editing domain both in AlaRS and in many homologous free-standing editing proteins. Crystal structure and functional analyses showed that C-Ala forms an ancient single-stranded nucleic acid binding motif that promotes cooperative binding of both aminoacylation and editing domains to tRNA(Ala). In addition, C-Ala may have played an essential role in the evolution of AlaRSs by coupling aminoacylation to editing to prevent mistranslation.

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Primary Citation of related structures