ISDA: 3G86

Deposition Date 2009-02-11

Release Date 2009-09-08

Last Version Date 2023-09-06

Entry Detail

PDB ID:

3G86

Keywords:

TRANSFERASE

Title:

Hepatitis C virus polymerase NS5B (BK 1-570) with thiazine inhibitor

Biological Source:

Source Organism:

Hepatitis C virus (Taxon ID: 11105)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.20 Å

R-Value Free:

0.23

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:RNA-directed RNA polymerase
Chain IDs:A, B
Chain Length:576
Number of Molecules:2
Biological Source:Hepatitis C virus

UniProt ID:P26663 Pfam ID:PF00998 EC:3.4.21.98

Ligand Molecules

T18

Primary Citation

Non-nucleoside inhibitors of HCV polymerase NS5B. Part 2: Synthesis and structure-activity relationships of benzothiazine-substituted quinolinediones

de Vicente, J, Hendricks, R.T, Smith, D.B, Fell, J.B, Fischer, J, Spencer, S.R, Stengel, P.J, Mohr, P, Robinson, J.E, Blake, J.F, Hilgenkamp, R.K, Yee, C, Adjabeng, G, Elworthy, T.R, Tracy, J, Chin, E, Li, J, Wang, B, Bamberg, J.T, Stephenson, R, Oshiro, C, Harris, S.F, Ghate, M, Leveque, V, Najera, I, Le Pogam, S, Rajyaguru, S, Ao-Ieong, G, Alexandrova, L, Larrabee, S, Brandl, M, Briggs, A, Sukhtankar, S, Farrell, R, Xu, B.Show

Bioorg.Med.Chem.Lett. 19 3642 3646 (2009)

PMID: 19457662 DOI: 10.1016/j.bmcl.2009.05.004

Abstact

A new series of benzothiazine-substituted quinolinediones were evaluated as inhibitors of HCV polymerase NS5B. SAR studies on this series revealed a methyl sulfonamide group as a high affinity feature. Analogues with this group showed submicromolar potencies in the HCV cell based replicon assay. Pharmacokinetic and toxicology studies were also performed on a selected compound (34) to evaluate in vivo properties of this new class of inhibitors of HCV NS5B polymerase.

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Protein

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Primary Citation of related structures

Abstact

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