3G7L image
Deposition Date 2009-02-10
Release Date 2009-04-21
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3G7L
Keywords:
Title:
Chromodomain of Chp1 in complex with Histone H3K9me3 peptide
Biological Source:
Source Organism:
Schizosaccharomyces pombe (Taxon ID: 4896)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chromo domain-containing protein 1
Gene (Uniprot):chp1
Chain IDs:A
Chain Length:61
Number of Molecules:1
Biological Source:Schizosaccharomyces pombe
Polymer Type:polypeptide(L)
Molecule:Histone H3.1/H3.2
Gene (Uniprot):hht1, hht2
Mutations:R17Y
Chain IDs:B (auth: P)
Chain Length:16
Number of Molecules:1
Biological Source:
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
M3L B LYS N-TRIMETHYLLYSINE
Primary Citation
High-affinity binding of Chp1 chromodomain to K9 methylated histone H3 is required to establish centromeric heterochromatin
Mol.Cell 34 36 46 (2009)
PMID: 19362535 DOI: 10.1016/j.molcel.2009.02.024

Abstact

In fission yeast, assembly of centromeric heterochromatin requires the RITS complex, which consists of Ago1, Tas3, Chp1, and siRNAs derived from centromeric repeats. Recruitment of RITS to centromeres has been proposed to depend on siRNA-dependent targeting of Ago1 to centromeric sequences. Previously, we demonstrated that methylated lysine 9 of histone H3 (H3K9me) acts upstream of siRNAs during heterochromatin establishment. Our crystal structure of Chp1's chromodomain in complex with a trimethylated lysine 9 H3 peptide reveals extensive sites of contact that contribute to Chp1's high-affinity binding. We found that this high-affinity binding is critical for the efficient establishment of centromeric heterochromatin, but preassembled heterochromatin can be maintained when Chp1's affinity for H3K9me is greatly reduced.

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Primary Citation of related structures