3G2Q image
Entry Detail
PDB ID:
3G2Q
Keywords:
Title:
Crystal Structure of the Glycopeptide N-methyltransferase MtfA complexed with sinefungin
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-01-31
Release Date:
2009-05-05
Method Details:
Experimental Method:
Resolution:
2.18 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:PCZA361.24
Chain IDs:A, B
Chain Length:299
Number of Molecules:2
Biological Source:Amycolatopsis orientalis
Ligand Molecules
Primary Citation
Structure and function of the glycopeptide N-methyltransferase MtfA, a tool for the biosynthesis of modified glycopeptide antibiotics.
Chem.Biol. 16 401 410 (2009)
PMID: 19389626 DOI: 10.1016/j.chembiol.2009.02.007

Abstact

There is a considerable interest in the modification of existing antibiotics to generate new antimicrobials. Glycopeptide antibiotics (GPAs) are effective against serious Gram-positive bacterial pathogens including methicillin-resistant Staphylococcus aureus. However, resistance to these antibiotics is becoming a serious problem requiring new strategies. We show that the Amycolatopsis orientalis (S)-adenosyl-L-methionine-dependent methyltransferase MtfA, from the vancomycin-class GPA chloroeremomycin biosynthetic pathway, catalyzes in vivo and in vitro methyl transfer to generate methylated GPA derivatives of the teicoplanin class. The crystal structure of MtfA complexed with (S)-adenosyl-L-methionine, (S)-adenosylhomocysteine, or sinefungin inhibitor, coupled with mutagenesis, identified His228 as a likely general base required for methyl transfer to the N terminus of the glycopeptide. Computational docking and molecular dynamics simulations were used to model binding of demethyl-vancomycin aglycone to MtfA. These results demonstrate its utility as a tool for engineering methylated analogs of GPAs.

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