3G21 image
Entry Detail
PDB ID:
3G21
Keywords:
Title:
Crystal structure of the C-terminal domain of the Rous Sarcoma Virus capsid protein: Low pH
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-01-30
Release Date:
2009-06-02
Method Details:
Experimental Method:
Resolution:
0.90 Å
R-Value Free:
0.14
R-Value Work:
0.12
R-Value Observed:
0.12
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Gag polyprotein
Chain IDs:A
Chain Length:77
Number of Molecules:1
Biological Source:Rous sarcoma virus
Ligand Molecules
Primary Citation
Proton-linked dimerization of a retroviral capsid protein initiates capsid assembly
Structure 17 737 748 (2009)
PMID: 19446529 DOI: 10.1016/j.str.2009.03.010

Abstact

In mature retroviral particles, the capsid protein (CA) forms a shell encasing the viral replication complex. Human immunodeficiency virus (HIV) CA dimerizes in solution, through its C-terminal domain (CTD), and this interaction is important for capsid assembly. In contrast, other retroviral capsid proteins, including that of Rous sarcoma virus (RSV), do not dimerize with measurable affinity. Here we show, using X-ray crystallography and other biophysical methods, that acidification causes RSV CA to dimerize in a fashion analogous to HIV CA, and that this drives capsid assembly in vitro. A pair of aspartic acid residues, located within the CTD dimer interface, explains why dimerization is linked to proton binding. Our results show that despite overarching structural similarities, the intermolecular forces responsible for forming and stabilizing the retroviral capsid differ markedly across retroviral genera. Our data further suggest that proton binding may regulate RSV capsid assembly, or modulate stability of the assembled capsid.

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