3FRP image
Deposition Date 2009-01-08
Release Date 2009-04-28
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3FRP
Title:
Crystal Structure of Cobra Venom Factor, a Co-factor for C3- and C5 convertase CVFBb
Biological Source:
Source Organism:
Naja kaouthia (Taxon ID: 8649)
Method Details:
Experimental Method:
Resolution:
2.61 Å
R-Value Free:
0.29
R-Value Work:
0.24
R-Value Observed:
0.25
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cobra venom factor alpha chain
Chain IDs:A
Chain Length:627
Number of Molecules:1
Biological Source:Naja kaouthia
Polymer Type:polypeptide(L)
Molecule:Cobra venom factor beta chain
Chain IDs:C (auth: B)
Chain Length:379
Number of Molecules:1
Biological Source:Naja kaouthia
Polymer Type:polypeptide(L)
Molecule:Cobra venom factor gamma chain
Chain IDs:B (auth: G)
Chain Length:252
Number of Molecules:1
Biological Source:Naja kaouthia
Ligand Molecules
Primary Citation
The Crystal Structure of Cobra Venom Factor, a Cofactor for C3- and C5-Convertase CVFBb.
Structure 17 611 619 (2009)
PMID: 19368894 DOI: 10.1016/j.str.2009.01.015

Abstact

Cobra venom factor (CVF) is a functional analog of human complement component C3b, the active fragment of C3. Similar to C3b, in human and mammalian serum, CVF binds factor B, which is then cleaved by factor D, giving rise to the CVFBb complex that targets the same scissile bond in C3 as the authentic complement convertases C4bC2a and C3bBb. Unlike the latter, CVFBb is a stable complex and an efficient C5 convertase. We solved the crystal structure of CVF, isolated from Naja naja kouthia venom, at 2.6 A resolution. The CVF crystal structure, an intermediate between C3b and C3c, lacks the TED domain and has the CUB domain in an identical position to that seen in C3b. The similarly positioned CUB and slightly displaced C345c domains of CVF could play a vital role in the formation of C3 convertases by providing important primary binding sites for factor B.

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Primary Citation of related structures