3FLD image
Deposition Date 2008-12-18
Release Date 2009-02-10
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3FLD
Keywords:
Title:
Crystal structure of the trai c-terminal domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.40 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein traI
Gene (Uniprot):traI
Chain IDs:A, B
Chain Length:153
Number of Molecules:2
Biological Source:Escherichia coli K-12
Ligand Molecules
Primary Citation
A novel fold in the TraI relaxase-helicase c-terminal domain is essential for conjugative DNA transfer.
J.Mol.Biol. 386 554 568 (2009)
PMID: 19136009 DOI: 10.1016/j.jmb.2008.12.057

Abstact

TraI relaxase-helicase is the central catalytic component of the multiprotein relaxosome complex responsible for conjugative DNA transfer (CDT) between bacterial cells. CDT is a primary mechanism for the lateral propagation of microbial genetic material, including the spread of antibiotic resistance genes. The 2.4-A resolution crystal structure of the C-terminal domain of the multifunctional Escherichia coli F (fertility) plasmid TraI protein is presented, and specific structural regions essential for CDT are identified. The crystal structure reveals a novel fold composed of a 28-residue N-terminal alpha-domain connected by a proline-rich loop to a compact alpha/beta-domain. Both the globular nature of the alpha/beta-domain and the presence as well as rigidity of the proline-rich loop are required for DNA transfer and single-stranded DNA binding. Taken together, these data establish the specific structural features of this noncatalytic domain that are essential to DNA conjugation.

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Primary Citation of related structures