ISDA

Deposition Date 2008-12-11

Release Date 2009-01-06

Last Version Date 2024-11-20

Entry Detail

PDB ID:

3FIF

Keywords:

structural genomics, unknown function

Title:

Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.

Biological Source:

Source Organism:

Escherichia coli K-12 (Taxon ID: 83333)
Escherichia coli (Taxon ID: 562)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.70 Å

R-Value Free:

0.25

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

P 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Uncharacterized lipoprotein ygdR
Gene (Uniprot):ygdR
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:61
Number of Molecules:8
Biological Source:Escherichia coli K-12

UniProt ID:P65294 Pfam ID:PF06004

Polymer Type:polypeptide(L)
Molecule:Uncharacterized ligand
Chain IDs:I (auth: Y)
Chain Length:7
Number of Molecules:1
Biological Source:Escherichia coli

Modified Residue

Compound ID	Chain ID	Parent Comp ID	Details	2D Image
MSE	A	MET	SELENOMETHIONINE

Primary Citation

Crystal structure of the ygdR protein from E.coli. Northeast Structural Genomics target ER382A.

Kuzin, A.P, Su, M, Seetharaman, J, Rossi, P, Chen, C.X, Jiang, M, Cunningham, K, Ma, L, Xiao, R, Liu, J.C, Baran, M, Swapna, G.V.T, Acton, T.B, Rost, B, Montelione, G.T, Hunt, J.F, Tong, L.Show

To be Published ? ? ? (?)

Primary Citation of related structures