3FDZ image
Entry Detail
PDB ID:
3FDZ
Keywords:
Title:
Crystal structure of phosphoglyceromutase from burkholderia pseudomallei 1710b with bound 2,3-diphosphoglyceric acid and 3-phosphoglyceric acid
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2008-11-26
Release Date:
2009-01-13
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.25
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Chain IDs:A
Chain Length:257
Number of Molecules:1
Biological Source:Burkholderia pseudomallei 1710b
Polymer Type:polypeptide(L)
Description:2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
Chain IDs:B
Chain Length:257
Number of Molecules:1
Biological Source:Burkholderia pseudomallei 1710b
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
NEP B HIS N1-PHOSPHONOHISTIDINE
Primary Citation
An ensemble of structures of Burkholderia pseudomallei 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase.
Acta Crystallogr.,Sect.F 67 1044 1050 (2011)
PMID: 21904048 DOI: 10.1107/S1744309111030405

Abstact

Burkholderia pseudomallei is a soil-dwelling bacterium endemic to Southeast Asia and Northern Australia. Burkholderia is responsible for melioidosis, a serious infection of the skin. The enzyme 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase (PGAM) catalyzes the interconversion of 3-phosphoglycerate and 2-phosphoglycerate, a key step in the glycolytic pathway. As such it is an extensively studied enzyme and X-ray crystal structures of PGAM enzymes from multiple species have been elucidated. Vanadate is a phosphate mimic that is a powerful tool for studying enzymatic mechanisms in phosphoryl-transfer enzymes such as phosphoglycerate mutase. However, to date no X-ray crystal structures of phosphoglycerate mutase have been solved with vanadate acting as a substrate mimic. Here, two vanadate complexes together with an ensemble of substrate and fragment-bound structures that provide a comprehensive picture of the function of the Burkholderia enzyme are reported.

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