3FD2 image
Deposition Date 2008-11-24
Release Date 2009-06-30
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3FD2
Keywords:
Title:
Crystal structure of mMsoI/DNA complex with calcium
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.69 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Site-specific DNA endonuclease I-MsoI
Gene (Uniprot):orf170
Chain IDs:A
Chain Length:373
Number of Molecules:1
Biological Source:Monomastix sp. (strain OKE-1), Monomastix sp. OKE-1, unidentified
Polymer Type:polydeoxyribonucleotide
Molecule:5'-D(*GP*CP*AP*GP*AP*AP*CP*GP*TP*CP*GP*TP*GP*AP*GP*AP*CP*AP*GP*TP*TP*CP*CP*G)-3'
Chain IDs:B
Chain Length:24
Number of Molecules:1
Biological Source:synthetic construct
Polymer Type:polydeoxyribonucleotide
Molecule:5'-D(*CP*GP*GP*AP*AP*CP*TP*GP*TP*CP*TP*CP*AP*CP*GP*AP*CP*GP*TP*TP*CP*TP*GP*C)-3'
Chain IDs:C
Chain Length:24
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
Generation of single-chain LAGLIDADG homing endonucleases from native homodimeric precursor proteins.
Nucleic Acids Res. 37 1650 1662 (2009)
PMID: 19153140 DOI: 10.1093/nar/gkp004

Abstact

Homing endonucleases (HEs) cut long DNA target sites with high specificity to initiate and target the lateral transfer of mobile introns or inteins. This high site specificity of HEs makes them attractive reagents for gene targeting to promote DNA modification or repair. We have generated several hundred catalytically active, monomerized versions of the well-characterized homodimeric I-CreI and I-MsoI LAGLIDADG family homing endonuclease (LHE) proteins. Representative monomerized I-CreI and I-MsoI proteins (collectively termed mCreIs or mMsoIs) were characterized in detail by using a combination of biochemical, biophysical and structural approaches. We also demonstrated that both mCreI and mMsoI proteins can promote cleavage-dependent recombination in human cells. The use of single chain LHEs should simplify gene modification and targeting by requiring the expression of a single small protein in cells, rather than the coordinate expression of two separate protein coding genes as is required when using engineered heterodimeric zinc finger or homing endonuclease proteins.

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Primary Citation of related structures