3F6Q image
Deposition Date 2008-11-06
Release Date 2008-12-02
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3F6Q
Title:
Crystal structure of integrin-linked kinase ankyrin repeat domain in complex with PINCH1 LIM1 domain
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Method Details:
Experimental Method:
Resolution:
1.60 Å
R-Value Free:
0.19
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Integrin-linked protein kinase
Gene (Uniprot):ILK
Chain IDs:A
Chain Length:179
Number of Molecules:1
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:LIM and senescent cell antigen-like-containing domain protein 1
Gene (Uniprot):LIMS1
Chain IDs:B
Chain Length:72
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
The structural basis of integrin-linked kinase-PINCH interactions.
Proc.Natl.Acad.Sci.USA 105 20677 20682 (2008)
PMID: 19074270 DOI: 10.1073/pnas.0811415106

Abstact

The heterotrimeric complex between integrin-linked kinase (ILK), PINCH, and parvin is an essential signaling platform, serving as a convergence point for integrin and growth-factor signaling and regulating cell adhesion, spreading, and migration. We report a 1.6-A crystal structure of the ILK ankyrin repeat domain bound to the PINCH1 LIM1 domain, revealing the molecular basis of ILK-PINCH interactions and providing a structural description of this region of ILK. This structure identifies 5 ankyrin repeats in ILK, explains previous deletion mutagenesis data, permits identification of ILK and PINCH1 point mutations that disrupt the interaction, shows how zincs are coordinated by PINCH1 LIM1, and suggests that conformational flexibility and twisting between the 2 zinc fingers within the LIM1 domain may be important for ILK binding. These data provide an atomic-resolution description of a key interaction in the ILK-PINCH-parvin scaffolding complex.

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