3F4D image
Deposition Date 2008-10-31
Release Date 2009-08-18
Last Version Date 2023-11-15
Entry Detail
PDB ID:
3F4D
Keywords:
Title:
Crystal structure of organophosphorus hydrolase from Geobacillus stearothermophilus strain 10
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.36 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Organophosphorus hydrolase
Chain IDs:A, B
Chain Length:332
Number of Molecules:2
Biological Source:Geobacillus stearothermophilus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KCX A LYS LYSINE NZ-CARBOXYLIC ACID
Ligand Molecules
Primary Citation
Structural basis for thermostability revealed through the identification and characterization of a highly thermostable phosphotriesterase-like lactonase from Geobacillus stearothermophilus.
Arch.Biochem.Biophys. 488 109 120 (2009)
PMID: 19615330 DOI: 10.1016/j.abb.2009.06.005

Abstact

A new enzyme homologous to phosphotriesterase was identified from the bacterium Geobacillus stearothermophilus (GsP). This enzyme belongs to the amidohydrolase family and possesses the ability to hydrolyze both lactone and organophosphate (OP) compounds, making it a phosphotriesterase-like lactonase (PLL). GsP possesses higher OP-degrading activity than recently characterized PLLs, and it is extremely thermostable. GsP is active up to 100 degrees C with an energy of activation of 8.0 kcal/mol towards ethyl paraoxon, and it can withstand an incubation temperature of 60 degrees C for two days. In an attempt to understand the thermostability of PLLs, the X-ray structure of GsP was determined and compared to those of existing PLLs. Based upon a comparative analysis, a new thermal advantage score and plot was developed and reveals that a number of different factors contribute to the thermostability of PLLs.

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