3F3F image
Deposition Date 2008-10-30
Release Date 2009-04-07
Last Version Date 2023-12-27
Entry Detail
PDB ID:
3F3F
Title:
Crystal structure of the nucleoporin pair Nup85-Seh1, space group P21
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.26
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nucleoporin SEH1
Gene (Uniprot):SEH1
Chain IDs:A, B, E, F
Chain Length:351
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Nucleoporin NUP85
Gene (Uniprot):NUP85
Chain IDs:C, D, G, H
Chain Length:570
Number of Molecules:4
Biological Source:Saccharomyces cerevisiae
Ligand Molecules
Primary Citation
A fence-like coat for the nuclear pore membrane.
Mol.Cell 32 815 826 (2008)
PMID: 19111661 DOI: 10.1016/j.molcel.2008.12.001

Abstact

We recently proposed a cylindrical coat for the nuclear pore membrane in the nuclear pore complex (NPC). This scaffold is generated by multiple copies of seven nucleoporins. Here, we report three crystal structures of the nucleoporin pair Seh1*Nup85, which is part of the coat cylinder. The Seh1*Nup85 assembly bears resemblance in its shape and dimensions to that of another nucleoporin pair, Sec13*Nup145C. Furthermore, the Seh1*Nup85 structures reveal a hinge motion that may facilitate conformational changes in the NPC during import of integral membrane proteins and/or during nucleocytoplasmic transport. We propose that Seh1*Nup85 and Sec13*Nup145C form 16 alternating, vertical rods that are horizontally linked by the three remaining nucleoporins of the coat cylinder. Shared architectural and mechanistic principles with the COPII coat indicate a common evolutionary origin and support the notion that the NPC coat represents another class of membrane coats.

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