3EYL image
Entry Detail
PDB ID:
3EYL
Keywords:
Title:
Crystal structure of XIAP BIR3 domain in complex with a Smac-mimetic compound
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2008-10-21
Release Date:
2008-11-25
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.19
Space Group:
I 41 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Baculoviral IAP repeat-containing protein 4
Chain IDs:A, B
Chain Length:122
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
Designing Smac-mimetics as antagonists of XIAP, cIAP1, and cIAP2.
Biochem.Biophys.Res.Commun. 378 162 167 (2009)
PMID: 18992220 DOI: 10.1016/j.bbrc.2008.10.139

Abstact

Inhibitor of apoptosis proteins (IAPs) such as XIAP, cIAP1, and cIAP2 are upregulated in many cancer cells. Several compounds targeting IAPs and inducing cell death in cancer cells have been developed. Some of these are synthesized mimicking the N-terminal tetrapeptide sequence of Smac/DIABLO, the natural endogenous IAPs inhibitor. Starting from such conceptual design, we generated a library of 4-substituted azabicyclo[5.3.0]alkane Smac-mimetics. Here we report the crystal structure of the BIR3 domain from XIAP in complex with Smac037, a compound designed according to structural principles emerging from our previously analyzed XIAP BIR3/Smac-mimetic complexes. In parallel, we present an in silico docking analysis of three Smac-mimetics to the BIR3 domain of cIAP1, providing general considerations for the development of high affinity lead compounds targeting three members of the IAP family.

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