3EYK image
Deposition Date 2008-10-21
Release Date 2009-01-13
Last Version Date 2024-10-16
Entry Detail
PDB ID:
3EYK
Keywords:
Title:
Structure of Influenza Haemagglutinin in complex with an inhibitor of membrane fusion
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA1 chain
Gene (Uniprot):HA
Chain IDs:A
Chain Length:323
Number of Molecules:1
Biological Source:Influenza A virus
Polymer Type:polypeptide(L)
Molecule:Hemagglutinin HA2 chain
Gene (Uniprot):HA
Chain IDs:B
Chain Length:172
Number of Molecules:1
Biological Source:Influenza A virus
Ligand Molecules
Primary Citation
Structure of influenza hemagglutinin in complex with an inhibitor of membrane fusion
Proc.Natl.Acad.Sci.USA 105 17736 17741 (2008)
PMID: 19004788 DOI: 10.1073/pnas.0807142105

Abstact

The influenza surface glycoprotein hemagglutinin (HA) is a potential target for antiviral drugs because of its key roles in the initial stages of infection: receptor binding and the fusion of virus and cell membranes. The structure of HA in complex with a known inhibitor of membrane fusion and virus infectivity, tert-butyl hydroquinone (TBHQ), shows that the inhibitor binds in a hydrophobic pocket formed at an interface between HA monomers. Occupation of this site by TBHQ stabilizes the neutral pH structure through intersubunit and intrasubunit interactions that presumably inhibit the conformational rearrangements required for membrane fusion. The nature of the binding site suggests routes for the chemical modification of TBHQ that could lead to the development of more potent inhibitors of membrane fusion and potential anti-influenza drugs.

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Primary Citation of related structures