3EYD image
Deposition Date 2008-10-20
Release Date 2009-02-10
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3EYD
Keywords:
Title:
Structure of HCV NS3-4A Protease with an Inhibitor Derived from a Boronic Acid
Biological Source:
Source Organism:
Hepatitis C virus subtype 1a (Taxon ID: 31646)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.25
R-Value Work:
0.18
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:HCV NS3
Chain IDs:A, C
Chain Length:200
Number of Molecules:2
Biological Source:Hepatitis C virus subtype 1a
Polymer Type:polypeptide(L)
Molecule:HCV NS4a peptide
Mutations:C22S
Chain IDs:B, D
Chain Length:23
Number of Molecules:2
Biological Source:
Primary Citation
Potent inhibitors of HCV-NS3 protease derived from boronic acids.
Bioorg.Med.Chem.Lett. 19 180 183 (2009)
PMID: 19022670 DOI: 10.1016/j.bmcl.2008.10.124

Abstact

Chronic hepatitis C infection is the leading causes for cirrhosis of the liver and hepatocellular carcinoma, leading to liver failure and liver transplantation. The etiological agent, HCV virus produces a single positive strand of RNA that is processed with the help of serine protease NS3 to produce mature virus. Inhibition of NS3 protease can be potentially used to develop effective drugs for HCV infections. Numerous efforts are now underway to develop potent inhibitors of HCV protease that contain ketoamides as serine traps. Herein we report the synthesis of a series of potent inhibitors that contain a boronic acid as a serine trap. The activity of these compounds were optimized to 200pM. X-ray structure of compound 17 bound to NS3 protease is also discussed.

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