ISDA: 3EWH

Deposition Date 2008-10-15

Release Date 2009-08-25

Last Version Date 2023-12-27

Entry Detail

PDB ID:

3EWH

Keywords:

TRANSFERASE

Title:

Crystal structure of the VEGFR2 kinase domain in complex with a pyridyl-pyrimidine benzimidazole inhibitor

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Trichoplusia ni

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

1.60 Å

R-Value Free:

0.23

R-Value Work:

0.20

Space Group:

P 1 21 1

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:vascular endothelial growth factor receptor 2
Gene (Uniprot):KDR
Mutagens:C817A, V916T, E990V
Chain IDs:A
Chain Length:314
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P35968 Pfam ID:PF07714 EC:2.7.10.1

Ligand Molecules

EDO

K11

Primary Citation

Pyridyl-pyrimidine benzimidazole derivatives as potent, selective, and orally bioavailable inhibitors of Tie-2 kinase.

Cee, V.J, Cheng, A.C, Romero, K, Bellon, S, Mohr, C, Whittington, D.A, Bak, A, Bready, J, Caenepeel, S, Coxon, A, Deak, H.L, Fretland, J, Gu, Y, Hodous, B.L, Huang, X, Kim, J.L, Lin, J, Long, A.M, Nguyen, H, Olivieri, P.R, Patel, V.F, Wang, L, Zhou, Y, Hughes, P, Geuns-Meyer, S.Show

Bioorg.Med.Chem.Lett. 19 424 427 (2009)

PMID: 19062275 DOI: 10.1016/j.bmcl.2008.11.056

Abstact

Selective small molecule inhibitors of Tie-2 kinase are important tools for the validation of Tie-2 signaling in pathological angiogenesis. Reported herein is the optimization of a nonselective scaffold into a potent and highly selective inhibitor of Tie-2 kinase.

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