3EGK image
Deposition Date 2008-09-10
Release Date 2008-09-30
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3EGK
Keywords:
Blood Clotting/Hydrolase Inhibitor
Title:
KNOBLE Inhibitor
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.20 Å
R-Value Free:
0.31
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
3EGK validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Thrombin heavy chain
Gene (Uniprot):F2
Chain IDs:B (auth: H)
Chain Length:259
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00734 Pfam ID:PF00089, PF09396 EC:3.4.21.5
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Hirudin variant-1
Chain IDs:C (auth: I)
Chain Length:11
Number of Molecules:1
Biological Source:
UniProt ID:P01050
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Thrombin light chain
Gene (Uniprot):F2
Chain IDs:A (auth: L)
Chain Length:36
Number of Molecules:1
Biological Source:Homo sapiens
UniProt ID:P00734 Pfam ID:PF00089, PF09396 EC:3.4.21.5
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
TYS C TYR O-SULFO-L-TYROSINE
Ligand Molecules
M18
NA
Primary Citation
KNOBLE: a knowledge-based approach for the design and synthesis of readily accessible small-molecule chemical probes to test protein binding
Angew.Chem.Int.Ed.Engl. 46 9105 9109 (2007)
PMID: 17955562 DOI: 10.1002/anie.200703323
Primary Citation of related structures
1K22
1H8D
1YPG
2ZDA
2ZGX
2ZHQ