3EEE image
Deposition Date 2008-09-04
Release Date 2008-11-25
Last Version Date 2023-08-30
Entry Detail
PDB ID:
3EEE
Title:
Probing the function of heme distortion in the H-NOX family
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.12 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Methyl-accepting chemotaxis protein
Gene (Uniprot):Tar4
Mutations:P115A
Chain IDs:A, B, C, D
Chain Length:188
Number of Molecules:4
Biological Source:Thermoanaerobacter tengcongensis
Primary Citation
Probing the function of heme distortion in the H-NOX family.
Acs Chem.Biol. 3 703 710 (2008)
PMID: 19032091 DOI: 10.1021/cb800185h

Abstact

Hemoproteins carry out diverse functions utilizing a wide range of chemical reactivity while employing the same heme prosthetic group. It is clear from high-resolution crystal structures and biochemical studies that protein-bound hemes are not planar and adopt diverse conformations. The crystal structure of an H-NOX domain from Thermoanaerobacter tengcongensis (Tt H-NOX) contains the most distorted heme reported to date. In this study, Tt H-NOX was engineered to adopt a flatter heme by mutating proline 115, a conserved residue in the H-NOX family, to alanine. Decreasing heme distortion in Tt H-NOX increases affinity for oxygen and decreases the reduction potential of the heme iron. Additionally, flattening the heme is associated with significant shifts in the N-terminus of the protein. These results show a clear link between the heme conformation and Tt H-NOX structure and demonstrate that heme distortion is an important determinant for maintaining biochemical properties in H-NOX proteins.

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Primary Citation of related structures