3E6U image
Deposition Date 2008-08-16
Release Date 2009-06-23
Last Version Date 2024-03-20
Entry Detail
PDB ID:
3E6U
Title:
Crystal structure of Human LanCL1
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.27
R-Value Work:
0.24
R-Value Observed:
0.24
Space Group:
P 32 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:LanC-like protein 1
Gene (Uniprot):LANCL1
Chain IDs:A, B (auth: C), C (auth: B), D
Chain Length:411
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure of human lanthionine synthetase C-like protein 1 and its interaction with Eps8 and glutathione
Genes Dev. 23 1387 1392 (2009)
PMID: 19528316 DOI: 10.1101/gad.1789209

Abstact

Eukaryotic lanthionine synthetase C-like protein 1 (LanCL1) is homologous to prokaryotic lanthionine cyclases, yet its biochemical functions remain elusive. We report the crystal structures of human LanCL1, both free of and complexed with glutathione, revealing glutathione binding to a zinc ion at the putative active site formed by conserved GxxG motifs. We also demonstrate by in vitro affinity analysis that LanCL1 binds specifically to the SH3 domain of a signaling protein, Eps8. Importantly, expression of LanCL1 mutants defective in Eps8 interaction inhibits nerve growth factor (NGF)-induced neurite outgrowth, providing evidence for the biological significance of this novel interaction in cellular signaling and differentiation.

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Primary Citation of related structures