3E2U image
Deposition Date 2008-08-06
Release Date 2008-08-19
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3E2U
Keywords:
Title:
Crystal structure of the zink-knuckle 2 domain of human CLIP-170 in complex with CAP-Gly domain of human dynactin-1 (p150-GLUED)
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.60 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Dynactin subunit 1
Gene (Uniprot):DCTN1
Chain IDs:A, B, C, D
Chain Length:97
Number of Molecules:4
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:CAP-Gly domain-containing linker protein 1
Gene (Uniprot):CLIP1
Chain IDs:E, F, G, H
Chain Length:42
Number of Molecules:4
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Structure-function relationship of CAP-Gly domains
Nat.Struct.Mol.Biol. 14 959 967 (2007)
PMID: 17828277 DOI: 10.1038/nsmb1291

Abstact

In all eukaryotes, CAP-Gly proteins control important cellular processes. The molecular mechanisms underlying the functions of CAP-Gly domains, however, are still poorly understood. Here we use the complex formed between the CAP-Gly domain of p150(glued) and the C-terminal zinc knuckle of CLIP170 as a model system to explore the structure-function relationship of CAP-Gly-mediated protein interactions. We demonstrate that the conserved GKNDG motif of CAP-Gly domains is responsible for targeting to the C-terminal EEY/F sequence motifs of CLIP170, EB proteins and microtubules. The CAP-Gly-EEY/F interaction is essential for the recruitment of the dynactin complex by CLIP170 and for activation of CLIP170. Our findings define the molecular basis of CAP-Gly domain function, including the tubulin detyrosination-tyrosination cycle. They further establish fundamental roles for the interaction between CAP-Gly proteins and C-terminal EEY/F sequence motifs in regulating complex and dynamic cellular processes.

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Primary Citation of related structures