ISDA

Deposition Date 2008-08-05

Release Date 2008-08-19

Last Version Date 2023-08-30

Entry Detail

PDB ID:

3E2M

Keywords:

CELL ADHESION

Title:

LFA-1 I domain bound to inhibitors

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: )

Host Organism:

ESCHERICHIA COLI

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.00 Å

R-Value Free:

0.28

R-Value Work:

0.21

R-Value Observed:

0.21

Space Group:

P 21 21 2

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Integrin alpha-L
Gene (Uniprot):ITGAL
Chain IDs:A, B
Chain Length:185
Number of Molecules:2
Biological Source:Homo sapiens

UniProt ID:P20701 Pfam ID:PF00092

Ligand Molecules

E2M

Primary Citation

Structure-activity relationship of ortho- and meta-phenol based LFA-1 ICAM inhibitors

Lin, E.Y, Guckian, K.M, Silvian, L, Chin, D, Boriack-Sjodin, P.A, van Vlijmen, H, Friedman, J.E, Scott, D.M.Show

Bioorg.Med.Chem.Lett. 18 5245 5248 (2008)

PMID: 18783948 DOI: 10.1016/j.bmcl.2008.08.062

Abstact

LFA-1 ICAM inhibitors based on ortho- and meta-phenol templates were designed and synthesized by Mitsunobu chemistry. The selection of targets was guided by X-ray co-crystal data, and led to compounds which showed an up to 30-fold increase in potency over reference compound 1 in the LFA-1/ICAM1-Ig assay. The most active compound exploited a new hydrogen bond to the I-domain and exhibited subnanomolar potency.

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Protein

Chemical

Disease

Primary Citation of related structures