3DYA image
Deposition Date 2008-07-25
Release Date 2008-11-25
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3DYA
Keywords:
Title:
HIV-1 RT with non-nucleoside inhibitor annulated Pyrazole 1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:REVERSE TRANSCRIPTASE/RIBONUCLEASE H
Gene (Uniprot):gag-pol
Chain IDs:A
Chain Length:561
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
Polymer Type:polypeptide(L)
Molecule:p51 RT
Gene (Uniprot):gag-pol
Chain IDs:B
Chain Length:440
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
Ligand Molecules
Primary Citation

Abstact

Non-nucleoside reverse transcriptase inhibitors (NNRTIs) are recommended components of preferred combination antiretroviral therapies used for the treatment of HIV. These regimens are extremely effective in suppressing virus replication. Structure-based optimization of diaryl ether inhibitors led to the discovery of a new series of pyrazolo[3,4-c]pyridazine NNRTIs that bind the reverse transcriptase enzyme of human immunodeficiency virus-1 (HIV-RT) in an expanded volume relative to most other inhibitors in this class.The binding mode maintains the beta13 and beta14 strands bearing Pro236 in a position similar to that in the unliganded reverse transcriptase structure, and the distribution of interactions creates the opportunity for substantial resilience to single point mutations. Several pyrazolopyridazine NNRTIs were found to be highly effective against wild-type and NNRTI-resistant viral strains in cell culture.

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Protein

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Disease

Primary Citation of related structures