3DRX image
Entry Detail
PDB ID:
3DRX
Title:
X-ray crystal structure of human KCTD5 protein crystallized in high-salt buffer
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2008-07-11
Release Date:
2009-02-17
Method Details:
Experimental Method:
Resolution:
3.11 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.23
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:BTB/POZ domain-containing protein KCTD5
Chain IDs:A, B, C, D, E
Chain Length:202
Number of Molecules:5
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Pentameric assembly of potassium channel tetramerization domain-containing protein 5.
J.Mol.Biol. 387 175 191 (2009)
PMID: 19361449 DOI: 10.1016/j.jmb.2009.01.030

Abstact

We report the X-ray crystal structure of human potassium channel tetramerization domain-containing protein 5 (KCTD5), the first member of the family to be so characterized. Four findings were unexpected. First, the structure reveals assemblies of five subunits while tetramers were anticipated; pentameric stoichiometry is observed also in solution by scanning transmission electron microscopy mass analysis and analytical ultracentrifugation. Second, the same BTB (bric-a-brac, tramtrack, broad complex) domain surface mediates the assembly of five KCTD5 and four voltage-gated K(+) (Kv) channel subunits; four amino acid differences appear crucial. Third, KCTD5 complexes have well-defined N- and C-terminal modules separated by a flexible linker that swivels by approximately 30 degrees; the C-module shows a new fold and is required to bind Golgi reassembly stacking protein 55 with approximately 1 microM affinity, as judged by surface plasmon resonance and ultracentrifugation. Fourth, despite the homology reflected in its name, KCTD5 does not impact the operation of Kv4.2, Kv3.4, Kv2.1, or Kv1.2 channels.

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