3DPU image
Deposition Date 2008-07-09
Release Date 2008-08-12
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3DPU
Title:
RocCOR domain tandem of Rab family protein (Roco)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.90 Å
R-Value Free:
0.27
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Rab family protein
Gene (Uniprot):CT1526
Mutagens:E917R
Chain IDs:A, B
Chain Length:535
Number of Molecules:2
Biological Source:Chlorobaculum tepidum
Ligand Molecules
Primary Citation
Structure of the Roc-COR domain tandem of C. tepidum, a prokaryotic homologue of the human LRRK2 Parkinson kinase
Embo J. 27 2239 2249 (2008)
PMID: 18650931 DOI: 10.1038/emboj.2008.150

Abstact

Ras of complex proteins (Roc) belongs to the superfamily of Ras-related small G-proteins that always occurs in tandem with the C-terminal of Roc (COR) domain. This Roc-COR tandem is found in the bacterial and eukaryotic world. Its most prominent member is the leucine-rich repeat kinase LRRK2, which is mutated and activated in Parkinson patients. Here, we investigated biochemically and structurally the Roco protein from Chlorobium tepidum. We show that Roc is highly homologous to Ras, whereas the COR domain is a dimerisation device. The juxtaposition of the G-domains and mutational analysis suggest that the Roc GTPase reaction is stimulated and/or regulated by dimerisation in a nucleotide-dependent manner. The region most conserved between bacteria and man is the interface between Roc and COR, where single-point Parkinson mutations of the Roc and COR domains are in close proximity. The analogous mutations in C. tepidum Roc-COR decrease the GTPase reaction rate, most likely due to a modification of the interaction between the Roc and COR domains.

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Protein

Chemical

Disease

Primary Citation of related structures
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