ISDA

Deposition Date 2008-06-30

Release Date 2008-12-16

Last Version Date 2024-11-13

Entry Detail

PDB ID:

3DM6

Keywords:

HYDROLASE

Title:

Beta-secretase 1 complexed with statine-based inhibitor

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.60 Å

R-Value Free:

0.28

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-secretase 1
Gene (Uniprot):BACE1
Chain IDs:A, B, C
Chain Length:406
Number of Molecules:3
Biological Source:Homo sapiens

UniProt ID:P56817 Pfam ID:PF00026 EC:3.4.23.46

Ligand Molecules

757

IPA

Primary Citation

Design, synthesis and SAR of potent statine-based BACE-1 inhibitors: exploration of P1 phenoxy and benzyloxy residues

Back, M, Nyhlen, J, Kvarnstrom, I, Appelgren, S, Borkakoti, N, Jansson, K, Lindberg, J, Nystrom, S, Hallberg, A, Rosenquist, S, Samuelsson, B.Show

Bioorg.Med.Chem. 16 9471 9486 (2008)

PMID: 18842420 DOI: 10.1016/j.bmc.2008.09.041

Abstact

Several BACE-1 inhibitors with low nanomolar level activities, encompassing a statine-based core structure with phenyloxymethyl- and benzyloxymethyl residues in the P1 position, are presented. The novel P1 modification introduced to allow the facile exploration of the S1 binding pocket of BACE-1, delivered highly promising inhibitors.

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Primary Citation of related structures