3DIF image
Deposition Date 2008-06-20
Release Date 2008-08-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3DIF
Keywords:
IMMUNE SYSTEM
Title:
Crystal structure of FabOX117
Biological Source:
Source Organism(s):
Homo sapiens (Taxon ID: 9606)
Expression System(s):
Homo sapiens
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.40 Å
R-Value Free:
0.28
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
P 1
3DIF validation report
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:FabOX117 Light Chain Fragment
Chain IDs:A, C
Chain Length:214
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:FabOX117 Heavy Chain Fragment
Chain IDs:B, D
Chain Length:229
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
A pipeline for the production of antibody fragments for structural studies using transient expression in HEK 293T cells.
Protein Expr.Purif. 62 83 89 (2008)
PMID: 18662785 DOI: 10.1016/j.pep.2008.06.017

Abstact

We describe a pipeline for the rapid production of recombinant Fabs derived from mouse monoclonal antibodies suitable for use in structural studies. The pipeline is exemplified by the production of three Fabs derived from the monoclonal antibodies OX108 (anti-CD200 receptor), OX117 and OX119 (anti-SIRPgamma). Heavy and light chain variable domains were inserted into separate expression vectors containing resident constant regions using In-Fusion PCR cloning. Following transient co-expression in HEK 293T cells, secreted Fab fragments were purified by metal chelate chromatography and gel filtration using an automated procedure with yields of up to 4mg/L of cell culture. Following crystallization trials, diffracting crystals were obtained for the recombinant Fabs of OX108 and OX117, and their structures solved to 2.3A and 2.4A, respectively.

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Primary Citation of related structures
3DGG
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