3DF6 image
Deposition Date 2008-06-11
Release Date 2009-06-16
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3DF6
Title:
The thermo- and acido-stable ORF-99 from the archaeal virus AFV1
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.05 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:ORF99
Gene (Uniprot):ORF99
Mutations:L27M, I70M
Chain IDs:A, B, C, D
Chain Length:99
Number of Molecules:4
Biological Source:Acidianus Filamentous Virus 1
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Ligand Molecules
Primary Citation
The thermo- and acido-stable ORF-99 from the archaeal virus AFV1
Protein Sci. 18 1316 1320 (2009)
PMID: 19472363 DOI: 10.1002/pro.122

Abstact

Acidianus Filamentous Virus 1 (AFV1), isolated from acidic hot springs, is an enveloped lipid-containing archaeal filamentous virus with a linear double-stranded DNA genome. It infects Acidianus, which is a hyperthermostable archaea growing at 85 degrees C and acidic pHs, below pH 3. AFV1-99, a protein of 99 amino acids of unknown function, has homologues in the archaeal virus families Lipothrixviridae and Rudiviridae. We determined the crystal structure of AFV1-99 at 2.05 A resolution. AFV1-99 has a new fold, is hyperthermostable (up to 95 degrees C) and resists to extreme pH (between pH 0 and 11) and to the combination of high temperature (95 degrees C) and low pH (pH 0). It possesses characteristics of hyperthermostable proteins, such as a high content of charged residues.

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Primary Citation of related structures