3DDX image
Deposition Date 2008-06-06
Release Date 2008-11-04
Last Version Date 2025-03-05
Entry Detail
PDB ID:
3DDX
Keywords:
Title:
HK97 bacteriophage capsid Expansion Intermediate-II model
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
14.00 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Major capsid protein
Gene (Uniprot):5
Chain IDs:A, B, C, D, E, F, G
Chain Length:282
Number of Molecules:7
Biological Source:Bacteriophage HK97
Ligand Molecules
Primary Citation
Virus capsid expansion driven by the capture of mobile surface loops.
Structure 16 1491 1502 (2008)
PMID: 18940605 DOI: 10.1016/j.str.2008.06.014

Abstact

The capsids of tailed-DNA bacteriophages first assemble as procapsids, which mature by converting into a new form that is strong enough to contain a densely packed viral chromosome. We demonstrate that the intersubunit crosslinking that occurs during maturation of HK97 capsids actually promotes the structural transformation. Small-angle X-ray scattering and crosslinking assays reveal that a shift in the crosslink pattern accompanies conversion of a semimature particle, Expansion Intermediate-I/II, to a more mature state, Balloon. This transition occurs in a switch-like fashion. We find that crosslink formation shifts the global conformational balance to favor the balloon state. A pseudoatomic model of EI-I/II derived from cryo-EM provides insight into the relationship between crosslink formation and conformational switching.

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Primary Citation of related structures