ISDA

Deposition Date 2008-06-04

Release Date 2008-08-12

Last Version Date 2023-08-30

Entry Detail

PDB ID:

3DCU

Keywords:

TRANSCRIPTION/TRANSCRIPTION ACTIVATOR

Title:

FXR with SRC1 and GSK8062

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.95 Å

R-Value Free:

0.22

R-Value Work:

0.18

Space Group:

F 2 3

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Bile acid receptor
Gene (Uniprot):NR1H4
Chain IDs:A
Chain Length:235
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q96RI1 Pfam ID:PF00104

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Nuclear receptor coactivator 1
Gene (Uniprot):NCOA1
Chain IDs:B
Chain Length:21
Number of Molecules:1
Biological Source:

UniProt ID:Q15788 EC:2.3.1.48

Ligand Molecules

O62

Primary Citation

Conformationally constrained farnesoid X receptor (FXR) agonists: Naphthoic acid-based analogs of GW 4064.

Akwabi-Ameyaw, A, Bass, J.Y, Caldwell, R.D, Caravella, J.A, Chen, L, Creech, K.L, Deaton, D.N, Jones, S.A, Kaldor, I, Liu, Y, Madauss, K.P, Marr, H.B, McFadyen, R.B, Miller, A.B, III, F.N, Parks, D.J, Spearing, P.K, Todd, D, Williams, S.P, Wisely, G.B.Show

Bioorg.Med.Chem.Lett. 18 4339 4343 (2008)

PMID: 18621523 DOI: 10.1016/j.bmcl.2008.06.073

Abstact

Starting from the known FXR agonist GW 4064 1a, a series of stilbene replacements were prepared. The 6-substituted 1-naphthoic acid 1b was an equipotent FXR agonist with improved developability parameters relative to 1a. Analog 1b also reduced the severity of cholestasis in the ANIT acute cholestatic rat model.

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Primary Citation of related structures