ISDA

Deposition Date 2008-05-28

Release Date 2009-01-06

Last Version Date 2024-02-21

Entry Detail

PDB ID:

3DA6

Keywords:

TRANSFERASE

Title:

Crystal Structure of human JNK3 complexed with N-(3-methyl-4-(3-(2-(methylamino)pyrimidin-4-yl)pyridin-2-yloxy)naphthalen-1-yl)-1H-benzo[d]imidazol-2-amine

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.00 Å

R-Value Free:

0.31

R-Value Work:

0.25

R-Value Observed:

0.25

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Mitogen-activated protein kinase 10
Gene (Uniprot):MAPK10
Chain IDs:A
Chain Length:364
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:P53779 Pfam ID:PF00069 EC:2.7.11.24

Ligand Molecules

BZ9

Primary Citation

Pyridyl-pyrimidine benzimidazole derivatives as potent, selective, and orally bioavailable inhibitors of Tie-2 kinase

Cee, V.J, Cheng, A.C, Romero, K, Bellon, S, Mohr, C, Whittington, D.A, Bak, A, Bready, J, Caenepeel, S, Coxon, A, Deak, H.L, Fretland, J, Gu, Y, Hodous, B.L, Huang, X, Kim, J.L, Lin, J, Long, A.M, Nguyen, H, Olivieri, P.R, Patel, V.F, Wang, L, Zhou, Y, Hughes, P, Geuns-Meyer, S.Show

Bioorg.Med.Chem.Lett. 19 424 427 (2009)

PMID: 19062275 DOI: 10.1016/j.bmcl.2008.11.056

Abstact

Selective small molecule inhibitors of Tie-2 kinase are important tools for the validation of Tie-2 signaling in pathological angiogenesis. Reported herein is the optimization of a nonselective scaffold into a potent and highly selective inhibitor of Tie-2 kinase.

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Primary Citation of related structures