3D7V image
Deposition Date 2008-05-22
Release Date 2008-06-24
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3D7V
Keywords:
Title:
Crystal structure of Mcl-1 in complex with an Mcl-1 selective BH3 ligand
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Homo sapiens (Taxon ID: 9606)
synthetic construct (Taxon ID: 32630)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.03 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Induced myeloid leukemia cell differentiation protein Mcl-1
Gene (Uniprot):Mcl1, MCL1
Chain IDs:A
Chain Length:162
Number of Molecules:1
Biological Source:Mus musculus, Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Bcl-2-like protein 11
Gene (Uniprot):BCL2L11
Mutations:L62A, F69A
Chain IDs:B
Chain Length:26
Number of Molecules:1
Biological Source:synthetic construct
Ligand Molecules
Primary Citation
A novel BH3 ligand that selectively targets Mcl-1 reveals that apoptosis can proceed without Mcl-1 degradation.
J.Cell Biol. 180 341 355 (2008)
PMID: 18209102 DOI: 10.1083/jcb.200708096

Abstact

Like Bcl-2, Mcl-1 is an important survival factor for many cancers, its expression contributing to chemoresistance and disease relapse. However, unlike other prosurvival Bcl-2-like proteins, Mcl-1 stability is acutely regulated. For example, the Bcl-2 homology 3 (BH3)-only protein Noxa, which preferentially binds to Mcl-1, also targets it for proteasomal degradation. In this paper, we describe the discovery and characterization of a novel BH3-like ligand derived from Bim, Bim(S)2A, which is highly selective for Mcl-1. Unlike Noxa, Bim(S)2A is unable to trigger Mcl-1 degradation, yet, like Noxa, Bim(S)2A promotes cell killing only when Bcl-x(L) is absent or neutralized. Furthermore, killing by endogenous Bim is not associated with Mcl-1 degradation. Thus, functional inactivation of Mcl-1 does not always require its elimination. Rather, it can be efficiently antagonized by a BH3-like ligand tightly engaging its binding groove, which is confirmed here with a structural study. Our data have important implications for the discovery of compounds that might kill cells whose survival depends on Mcl-1.

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Primary Citation of related structures