3D6R image
Deposition Date 2008-05-20
Release Date 2008-08-12
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3D6R
Keywords:
Title:
Structure of an avian influenza A virus NS1 protein effector domain
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 65 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-structural protein 1
Gene (Uniprot):NS
Chain IDs:A (auth: B), B (auth: A)
Chain Length:158
Number of Molecules:2
Biological Source:Influenza A virus
Primary Citation
Structure of an avian influenza A virus NS1 protein effector domain.
Virology 378 1 5 (2008)
PMID: 18585749 DOI: 10.1016/j.virol.2008.05.026

Abstact

Influenza A virus NS1 protein is a multifunctional virulence factor. Here, we report a crystal structure for the NS1 effector domain of avian influenza virus A/Duck/Albany/76. Comparison of this structure with that reported for a human strain shows both proteins share a common monomer conformation, albeit with subtle differences. Strikingly, our data reveal a novel helix-helix dimeric interface between monomers of the avian NS1 protein, which is also found in the human NS1 crystal lattice. We re-evaluate the current model of NS1 dimeric assembly, and provide biochemical evidence to show tryptophan-187 (a residue located at the helix-helix interface) is essential for dimerization of this effector domain.

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