3CXQ image
Deposition Date 2008-04-25
Release Date 2008-09-16
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3CXQ
Keywords:
Title:
Crystal structure of human glucosamine 6-phosphate N-acetyltransferase 1 bound to GlcN6P
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 43 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Glucosamine 6-phosphate N-acetyltransferase
Gene (Uniprot):GNPNAT1
Chain IDs:A
Chain Length:184
Number of Molecules:1
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Acceptor substrate binding revealed by crystal structure of human glucosamine-6-phosphate N-acetyltransferase 1
Febs Lett. 582 2973 2978 (2008)
PMID: 18675810 DOI: 10.1016/j.febslet.2008.07.040

Abstact

Glucosamine-6-phosphate (GlcN6P) N-acetyltransferase 1 (GNA1) is a key enzyme in the pathway toward biosynthesis of UDP-N-acetylglucosamine, an important donor substrate for N-linked glycosylation. GNA1 catalyzes the formation of N-acetylglucosamine-6-phosphate (GlcNAc6P) from acetyl-CoA (AcCoA) and the acceptor substrate GlcN6P. Here, we report crystal structures of human GNA1, including apo GNA1, the GNA1-GlcN6P complex and an E156A mutant. Our work showed that GlcN6P binds to GNA1 without the help of AcCoA binding. Structural analyses and mutagenesis studies have shed lights on the charge distribution in the GlcN6P binding pocket, and an important role for Glu156 in the substrate binding. Hence, these findings have broadened our knowledge of structural features required for the substrate affinity of GNA1.

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Primary Citation of related structures