3CX4 image
Deposition Date 2008-04-23
Release Date 2009-04-28
Last Version Date 2023-08-30
Entry Detail
PDB ID:
3CX4
Keywords:
Title:
Crystal Structure of E.coli GS mutant E377A in complex with ADP and oligosaccharides
Biological Source:
Source Organism:
Escherichia coli (Taxon ID: 562)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.29 Å
R-Value Free:
0.22
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
I 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Glycogen synthase
Gene (Uniprot):glgA
Mutagens:E377A
Chain IDs:A
Chain Length:485
Number of Molecules:1
Biological Source:Escherichia coli
Peptide-like Molecules
PRD_900001
PRD_900009
PRD_900030
Primary Citation
Oligosaccharide binding in Escherichia coli glycogen synthase.
Biochemistry 48 10089 10097 (2009)
PMID: 19761218 DOI: 10.1021/bi900916t

Abstact

Glycogen/starch synthase elongates glucan chains and is the key enzyme in the synthesis of glycogen in bacteria and starch in plants. Cocrystallization of Escherichia coli wild-type glycogen synthase (GS) with substrate ADPGlc and the glucan acceptor mimic HEPPSO produced a closed form of GS and suggests that domain-domain closure accompanies glycogen synthesis. Cocrystallization of the inactive GS mutant E377A with substrate ADPGlc and oligosaccharide results in the first oligosaccharide-bound glycogen synthase structure. Four bound oligosaccharides are observed, one in the interdomain cleft (G6a) and three on the N-terminal domain surface (G6b, G6c, and G6d). Extending from the center of the enzyme to the interdomain cleft opening, G6a mostly interacts with the highly conserved N-terminal domain residues lining the cleft of GS. The surface-bound oligosaccharides G6c and G6d have less interaction with enzyme and exhibit a more curled, helixlike structural arrangement. The observation that oligosaccharides bind only to the N-terminal domain of GS suggests that glycogen in vivo probably binds to only one side of the enzyme to ensure unencumbered interdomain movement, which is required for efficient, continuous glucan-chain synthesis.

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Primary Citation of related structures
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