3CPR image
Entry Detail
PDB ID:
3CPR
Keywords:
Title:
The crystal structure of Corynebacterium glutamicum dihydrodipicolinate synthase to 2.2 A resolution
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2008-04-01
Release Date:
2008-11-18
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Dihydrodipicolinate synthetase
Chain IDs:A, B
Chain Length:304
Number of Molecules:2
Biological Source:Corynebacterium glutamicum
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
KPI A LYS NZ-(1-CARBOXYETHYL)-LYSINE
Primary Citation
Characterization and crystal structure of lysine insensitive Corynebacterium glutamicum dihydrodipicolinate synthase (cDHDPS) protein.
Arch.Biochem.Biophys. 480 111 121 (2008)
PMID: 18930704 DOI: 10.1016/j.abb.2008.09.018

Abstact

The lysine insensitive Corynebacterium glutamicum dihydrodipicolinate synthase enzyme (cDHDPS) was recently successfully introduced into maize plants to enhance the level of lysine in the grain. To better understand lysine insensitivity of the cDHDPS, we expressed, purified, kinetically characterized the protein, and solved its X-ray crystal structure. The cDHDPS enzyme has a fold and overall structure that is highly similar to other DHDPS proteins. A noteworthy feature of the active site is the evidence that the catalytic lysine residue forms a Schiff base adduct with pyruvate. Analyses of the cDHDPS structure in the vicinity of the putative binding site for S-lysine revealed that the allosteric binding site in the Escherichia coli DHDPS protein does not exist in cDHDPS due to three non-conservative amino acids substitutions, and this is likely why cDHDPS is not feedback inhibited by lysine.

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