3CG5 image
Entry Detail
PDB ID:
3CG5
Keywords:
Title:
Crystal Structure of the Covalent Adduct Formed between TB B-lactamase and Clavulanate
Biological Source:
Host Organism:
PDB Version:
Deposition Date:
2008-03-04
Release Date:
2008-05-27
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Beta-lactamase
Chain IDs:A
Chain Length:265
Number of Molecules:1
Biological Source:Mycobacterium tuberculosis
Primary Citation
Structure of the covalent adduct formed between Mycobacterium tuberculosis beta-lactamase and clavulanate.
Biochemistry 47 5312 5316 (2008)
PMID: 18422342 DOI: 10.1021/bi8001055

Abstact

The intrinsic resistance of Mycobacterium tuberculosis to the beta-lactam class of antibiotics arises from a chromosomally encoded, extended spectrum, class A beta-lactamase, BlaC. Herein, we report the X-ray crystallographic structure of BlaC inhibited with clavulanate at a resolution of 1.7 A with an R-factor value of 0.180 and R-free value of 0.212 for the m/ z +154 clavulanate-derived fragment observed in the active site. Structural evidence reveals the presence of hydrogen bonds to the C1 carbonyl along with a coplanar arrangement of C1, C2, C3, and N4, which favors enolization to generate a trans-alpha,beta-eneamine, stabilizing the +154 adduct from hydrolysis. The irreversible inhibition of BlaC suggests that treatment of M. tuberculosis with a combination of a beta-lactam antibiotic and clavulanate may lead to rapid bactericidal activity.

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Primary Citation of related structures