3CDZ image
Deposition Date 2008-02-27
Release Date 2008-04-01
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3CDZ
Keywords:
Title:
Crystal structure of human factor VIII
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.98 Å
R-Value Free:
0.32
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
P 41 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Coagulation factor VIII heavy chain
Gene (Uniprot):F8
Chain IDs:A
Chain Length:754
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Coagulation factor VIII light chain
Gene (Uniprot):F8
Chain IDs:B
Chain Length:684
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Crystal structure of human factor VIII: implications for the formation of the factor IXa-factor VIIIa complex.
Structure 16 597 606 (2008)
PMID: 18400180 DOI: 10.1016/j.str.2008.03.001

Abstact

Factor VIII is a procofactor that plays a critical role in blood coagulation, and is missing or defective in hemophilia A. We determined the X-ray crystal structure of B domain-deleted human factor VIII. This protein is composed of five globular domains and contains one Ca(2+) and two Cu(2+) ions. The three homologous A domains form a triangular heterotrimer where the A1 and A3 domains serve as the base and interact with the C2 and C1 domains, respectively. The structurally homologous C1 and C2 domains reveal membrane binding features. Based on biochemical studies, a model of the factor IXa-factor VIIIa complex was constructed by in silico docking. Factor IXa wraps across the side of factor VIII, and an extended interface spans the factor VIII heavy and light chains. This model provides insight into the activation of factor VIII and the interaction of factor VIIIa with factor IXa on the membrane surface.

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Primary Citation of related structures