3CDP image
Deposition Date 2008-02-27
Release Date 2009-01-13
Last Version Date 2024-03-13
Entry Detail
PDB ID:
3CDP
Keywords:
Title:
Crystal structure of PPAR-gamma LBD complexed with a partial agonist, analogue of clofibric acid
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.80 Å
R-Value Free:
0.29
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Peroxisome proliferator-activated receptor gamma
Gene (Uniprot):PPARG
Chain IDs:A, B
Chain Length:286
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Synthesis, biological evaluation and molecular investigation of fluorinated peroxisome proliferator-activated receptors alpha/gamma dual agonists
Bioorg.Med.Chem. 20 2141 2151 (2012)
PMID: 22341573 DOI: 10.1016/j.bmc.2012.01.025

Abstact

PPARs are transcription factors that govern lipid and glucose homeostasis and play a central role in cardiovascular disease, obesity, and diabetes. Thus, there is significant interest in developing new agonists for these receptors. Given that the introduction of fluorine generally has a profound effect on the physical and/or biological properties of the target molecule, we synthesized a series of fluorinated analogs of the previously reported compound 2, some of which turned out to be remarkable PPARα and PPARγ dual agonists. Docking experiments were also carried out to gain insight into the interactions of the most active derivatives with both receptors.

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