3CA9 image
Entry Detail
PDB ID:
3CA9
Keywords:
Title:
Evolution of chlorella virus dUTPase
Biological Source:
PDB Version:
Deposition Date:
2008-02-19
Release Date:
2009-03-03
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.30
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Deoxyuridine triphosphatase
Chain IDs:A, B
Chain Length:165
Number of Molecules:2
Biological Source:Paramecium bursaria Chlorella virus IL3A
Primary Citation
Crystallization and crystal-packing studies of Chlorella virus deoxyuridine triphosphatase.
Acta Crystallogr.,Sect.F 65 1030 1034 (2009)
PMID: 19851015 DOI: 10.1107/S1744309109034459

Abstact

The 141-amino-acid deoxyuridine triphosphatase (dUTPase) from the algal Chlorella virus IL-3A and its Glu81Ser/Thr84Arg-mutant derivative Mu-22 were crystallized using the hanging-drop vapor-diffusion method at 298 K with polyethylene glycol as the precipitant. An apo IL-3A dUTPase with an amino-terminal T7 epitope tag and a carboxy-terminal histidine tag yielded cubic P2(1)3 crystals with unit-cell parameter a = 106.65 A. In the presence of dUDP, the enzyme produced thin stacked orthorhombic P222 crystals with unit-cell parameters a = 81.0, b = 96.2, c = 132.8 A. T7-histidine-tagged Mu-22 dUTPase formed thin stacked rectangular crystals. Amino-terminal histidine-tagged dUTPases did not crystallize but formed aggregates. Glycyl-seryl-tagged dUTPases yielded cubic P2(1)3 IL-3A crystals with unit-cell parameter a = 105.68 A and hexagonal P6(3) Mu-22 crystals with unit-cell parameters a = 132.07, c = 53.45 A, gamma = 120 degrees . Owing to the Thr84Arg mutation, Mu-22 dUTPase had different monomer-to-monomer interactions to those of IL-3A dUTPase.

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