3C9C image
Deposition Date 2008-02-15
Release Date 2008-05-13
Last Version Date 2023-08-30
Entry Detail
PDB ID:
3C9C
Title:
Structural Basis of Histone H4 Recognition by p55
Biological Source:
Source Organism:
Drosophila melanogaster (Taxon ID: 7227)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.24
R-Value Work:
0.20
Space Group:
P 31 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Chromatin assembly factor 1 p55 subunit
Gene (Uniprot):Caf1-55
Chain IDs:A
Chain Length:432
Number of Molecules:1
Biological Source:Drosophila melanogaster
Polymer Type:polypeptide(L)
Molecule:Histone H4, 27-residue peptide
Gene (Uniprot):His4, His4r, His4:CG31611, His4:CG33869, His4:CG33871, His4:CG33873, His4:CG33875, His4:CG33877, His4:CG33879, His4:CG33881, His4:CG33883, His4:CG33885, His4:CG33887, His4:CG33889, His4:CG33891, His4:CG33893, His4:CG33895, His4:CG33897, His4:CG33899, His4:CG33901, His4:CG33903, His4:CG33905, His4:CG33907, His4:CG33909
Chain IDs:B
Chain Length:27
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Structural basis of histone H4 recognition by p55.
Genes Dev. 22 1313 1318 (2008)
PMID: 18443147 DOI: 10.1101/gad.1653308

Abstact

p55 is a common component of many chromatin-modifying complexes and has been shown to bind to histones. Here, we present a crystal structure of Drosophila p55 bound to a histone H4 peptide. p55, a predicted WD40 repeat protein, recognizes the first helix of histone H4 via a binding pocket located on the side of a beta-propeller structure. The pocket cannot accommodate the histone fold of H4, which must be altered to allow p55 binding. Reconstitution experiments show that the binding pocket is important to the function of p55-containing complexes. These data demonstrate that WD40 repeat proteins use various surfaces to direct the modification of histones.

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Primary Citation of related structures